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Genomics Of Citrus, A Major Fruit Crop Of Tropical And Subtropical Regions

M. Roose, T. Close
Published 2008 · Biology

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Genomics in citrus and closely related genera is relatively advanced, with many linkage maps, several bacterial artificial chromosome libraries, a physical map, a fairly large and well-annotated expressed sequence tag collection, several microarrays, and a low coverage (1.2x) genome sequence for sweet orange. This chapter reviews the various genomics resources available for citrus. Integration of these resources, particularly those developed in different laboratories, remains a challenge.
This paper references
10.1002/J.1537-2197.1978.TB06149.X
LEAF ISOZYMES AS GENETIC MARKERS IN CITRUS
A. Torres (1978)
10.1508/CYTOLOGIA.52.213
Cytogenetics of Rutaceae IV
M. Guerra (1987)
10.1038/hdy.1993.131
Cytogenetics of Rutaceae. V. High chromosomal variability in Citrus species revealed by CMA/DAPI staining
M. Guerra (1993)
10.21273/JASHS.120.2.286
Origin and Inheritance of Dwarfing by the Citrus Rootstock Poncirus trifoliata `Flying Dragon'
F. S. Cheng (1995)
Techniques et utilisations des marqueurs moléculaires
A. Bervillé (1995)
10.1139/G96-118
Characterization of heterochromatic regions in 'Trovita' orange (Citrus sinensis Osbeck) chromosomes by the fluorescent staining and FISH methods.
T. Matsuyama (1996)
10.1007/s001220050437
Molecular markers flanking citrus tristeza virus resistance gene from Poncirus trifoliata (L.) Raf.
P. F. Mestre (1997)
10.1007/s001220050577
Identification of closely related citrus cultivars with inter-simple sequence repeat markers
D. Fang (1997)
10.1139/G97-809
Development of molecular markers linked to a gene controlling fruit acidity in citrus.
D. Fang (1997)
A high-resolution linkage map of the citrus tristeza virus resistance gene region in Poncirus trifoliata (L.) Raf.
D. Fang (1998)
10.1007/s001220050807
Phylogenetic relationships within the genus Citrus (Rutaceae) and related genera as revealed by RFLP and RAPD analysis
C. Federici (1998)
10.1007/s002990050562
Agrobacterium-mediated transformation of the commercially important citrus cultivar Washington navel orange
J. E. Bond (1998)
10.1007/s002990050570
Agrobacterium-mediated transformation of citrange: factors affecting transformation and regeneration
M. Cervera (1998)
10.1093/JHERED/89.1.83
The chromosomes of Citrus and Poncirus species and hybrids: identification of characteristic chromosomes and physical mapping of rDNA loci using in situ hybridization and fluorochrome banding.
M. Roose (1998)
10.1139/G99-003
QTL analysis of Na+ and Cl- accumulation related traits in an intergeneric BC1 progeny of Citrus and Poncirus under saline and nonsaline environments
I. Tozlu (1999)
10.1139/G99-035
QTL analysis of morphological traits in an intergeneric BC1 progeny of Citrus and Poncirus under saline and non-saline environments
I. Tozlu (1999)
10.1007/s001220051264
Genetic analysis of apomixis in Citrus and Poncirus by molecular markers
R. García (1999)
10.1007/s001220051419
Citrus phylogeny and genetic origin of important species as investigated by molecular markers
E. Nicolosi (2000)
10.17660/ACTAHORTIC.2000.535.1
Mapping the Citrus genome.
M. L. Roose (2000)
10.17660/ACTAHORTIC.2000.535.2
Development of molecular maps for rootstock breeding in Citrus.
G. R. Recupero (2000)
10.1007/s001220051382
Inheritance of citrus nematode resistance and its linkage with molecular markers
P. Ling (2000)
10.1007/s001220050047
Cytological heterozygosity and the hybrid origin of sweet orange [Citrus sinensis (L.) Osbeck]
A. Pedrosa (2000)
10.1007/s002990000257
Agrobacterium-mediated transformation of the commercially important grapefruit cultivar Rio Red (Citrus paradisi Macf.)
Z. N. Yang (2000)
10.1007/s004380100471
Fine genetic mapping and BAC contig development for the citrus tristeza virus resistance gene locus in Poncirus trifoliata (Raf.)
Z. Deng (2001)
10.1007/s001220051637
Evaluation of inter-simple sequence repeat analysis for mapping in Citrus and extension of the genetic linkage map
A. A. Sankar (2001)
10.21273/JASHS.126.3.309
Lemons: Diversity and Relationships with Selected Citrus Genotypes as Measured with Nuclear Genome Markers
O. Gulsen (2001)
10.1139/GEN-44-3-382
Construction of a 1.2-Mb contig including the citrus tristeza virus resistance gene locus using a bacterial artificial chromosome library of Poncirus trifoliata (L.) Raf.
Z. Yang (2001)
10.1016/S0168-9525(01)02442-8
Oranges and lemons: clues to the taxonomy of Citrus from molecular markers.
G. A. Moore (2001)
10.1006/MPEV.2001.1008
The diversification of Citrus clementina Hort. ex Tan., a vegetatively propagated crop species.
M. P. Bretó (2001)
10.1007/s00122-002-1095-x
Comparison between Poncirus and Citrus genetic linkage maps
C. Ruiz (2002)
10.21273/JASHS.128.4.0584
Development and Characterization of Microsatellite Markers in Citrus
R. Ahmad (2003)
10.1078/1439-6092-00058
What is Citrus? Taxonomic implications from a study of cp-DNA evolution in the tribe Citreae (Rutaceae subfamily Aurantioideae)
E. F. Araujo (2003)
10.1104/pp.011262
Sequence Analysis of a 282-Kilobase Region Surrounding the Citrus Tristeza Virus Resistance Gene (Ctv) Locus inPoncirus trifoliata L. Raf.1
Zhong-Nan Yang (2003)
10.1007/BF00223980
A genetic map of citrus based on the segregation of isozymes and RFLPs in an intergeneric cross
D. Jarrell (2004)
10.1007/s11103-004-7926-1
Development of a citrus genome-wide EST collection and cDNA microarray as resources for genomic studies
J. Forment (2004)
10.1007/BF00226090
A localized linkage map of the citrus tristeza virus resistance gene region
F. Gmitter (2004)
10.1023/A:1022284908424
High chromosomal variability of mandarins (Citrus spp.) revealed by CMA banding
M. Yamamoto (2004)
10.1104/pp.103.036178
Isolation and Characterization of a TERMINAL FLOWER Homolog and Its Correlation with Juvenility in Citrus
L. Pillitteri (2004)
10.1023/A:1003637116745
Genetic linkage maps of Citrus sunki Hort. ex. Tan. and Poncirus trifoliata (L.) Raf. and mapping of citrus tristeza virus resistance gene
M. Cristofani (2004)
10.1007/BF00223979
Linkage of restriction fragment length polymorphisms and isozymes in Citrus
R. Durham (2004)
10.1007/s00122-003-1486-7
QTL analysis of citrus tristeza virus-citradia interaction
M. Asins (2004)
10.1051/FRUITS:2005025
Integrated genetic map of citrus based on RAPD markers
M. Cristofani (2005)
10.1385/1-59259-827-7:177
Genetic transformation of mature citrus plants.
M. Cervera (2005)
10.21273/JASHS.130.2.191
Linkage of an Alternaria Disease Resistance Gene in Mandarin Hybrids with RAPD Fragments
Z. Dalkiliç (2005)
10.21273/HORTSCI.40.7.1963
The Search for the Authentic Citron (Citrus medica L.): Historic and Genetic Analysis
E. Nicolosi (2005)
10.1016/J.PLANTSCI.2005.01.013
Toward comprehensive expression profiling by microarray analysis in citrus: monitoring the expression profiles of 2213 genes during fruit development
T. Shimada (2005)
10.1016/J.PLANTSCI.2006.01.014
Profiling transcriptional changes in Citrus sinensis (L.) Osbeck challenged by herbivory from the xylem-feeding leafhopper Homalodisca coagulata (Say) by cDNA macroarray analysis
Jerry J. Mozoruk (2006)
10.1007/s00299-006-0197-3
Efficient production of transgenic citrus plants using isopentenyl transferase positive selection and removal of the marker gene by site-specific recombination
Alida Ballester (2006)
10.1007/s10577-006-1101-2
Karyotype diversity and the origin of grapefruit
A. Moraes (2006)
10.1186/1471-2229-6-21
The complete chloroplast genome sequence of Citrus sinensis (L.) Osbeck var 'Ridge Pineapple': organization and phylogenetic relationships to other angiosperms
M. Bausher (2006)
10.1186/1471-2164-8-31
Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance
J. Terol (2006)
10.1007/s11103-006-9037-7
Global Analysis of Gene Expression During Development and Ripening of Citrus Fruit Flesh. A Proposed Mechanism for Citric Acid Utilization
M. Cerćos (2006)
10.1007/s00122-006-0226-1
Mining and characterizing microsatellites from citrus ESTs
Chunxian Chen (2006)
10.1007/s00122-006-0255-9
Assessing genetic diversity and population structure in a citrus germplasm collection utilizing simple sequence repeat markers (SSRs)
N. Barkley (2006)
10.1007/s00438-006-0200-2
CIRE1, a novel transcriptionally active Ty1-copia retrotransposon from Citrus sinensis
Laura Rico-Cabanas (2006)
10.1007/s10722-006-0005-5
Phylogenetic relationships within Citrus and its related genera as inferred from AFLP markers
Xiao-ming Pang (2006)
10.21273/HORTSCI.42.1.7
Development of pGreen-derived GFP Binary Vectors for Citrus Transformation
Chunxian Chen (2007)
10.1007/BF02672069
Nuclear DNA content of some important plant species
K. Arumuganathan (2007)
10.1007/s11295-007-0083-3
EST-SSR genetic maps for Citrus sinensis and Poncirus trifoliata
Chunxian Chen (2007)
10.1007/s10535-007-0043-7
High efficient transgenic plant regeneration from embryogenic calluses of Citrus sinensis
Y. Duan (2007)
10.1016/J.FOODCHEM.2005.12.038
In vitro evaluation of the antioxidant activities in fruit extracts from citron and blood orange
G. K. Jayaprakasha (2007)



This paper is referenced by
10.4236/AJPS.2019.102022
In-Vitro Regeneration of Citrus sinensis (L.) Osbeck from Mature Seed Derived Embryogenic Callus on Different Solid Basal Media
M. Hasan (2019)
10.1007/s11105-018-1111-1
Development of Species-Specific InDel Markers in Citrus
Qiuying Fang (2018)
10.1016/B978-0-12-803133-9.00003-5
Biological aspects of citriculture
Z. Berk (2016)
10.1371/journal.pone.0166969
Hybrid Origins of Citrus Varieties Inferred from DNA Marker Analysis of Nuclear and Organelle Genomes
T. Shimizu (2016)
Etudes physiologiques et génétiques de caractères morpho-physico-chimiques des fruits d’agrumes au cours de la maturation jusqu’à l’abscission
H. Khefifi (2015)
10.1038/ng.2472
The draft genome of sweet orange (Citrus sinensis)
Q. Xu (2013)
10.1051/FRUITS/2011070
Simple Sequence Repeat (SSR) profiling of cultivated Limau Madu (Citrus reticulata Blanco) in Malaysia
Goh Pik Seah Elcy (2012)
10.1007/s00438-010-0593-9
Phylogenetic and evolutionary analysis of NBS-encoding genes in Rutaceae fruit crops
Q. Xu (2010)
A Wide Variety of Developmental Mutants and Agronomic Traits in Rice
Y. Nagato (2010)
10.1007/s11295-010-0319-5
Identification and characterization of microRNAs from citrus expressed sequence tags
X. Wu (2010)
10.1139/g09-017
Construction and characterization of two Citrus BAC libraries and identification of clones containing the phytoene synthase gene.
M. N. Baig (2009)
10.1016/J.YMPEV.2006.12.029
Phylogenetic and evolutionary analysis of NBS-encoding genes in Rosaceae fruit crops.
Q. Xu (2007)
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