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Natural Plasmids Of Filamentous Fungi.

A. J. Griffiths
Published 1995 · Biology, Medicine

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Among eukaryotes, plasmids have been found in fungi and plants but not in animals. Most plasmids are mitochondrial. In filamentous fungi, plasmids are commonly encountered in isolates from natural populations. Individual populations may show a predominance of one type, but some plasmids have a global distribution, often crossing species boundaries. Surveys have shown that strains can contain more than one type of plasmid and that different types appear to be distributed independently. In crosses, plasmids are generally inherited maternally. Horizontal transmission is by cell contact. Circular plasmids are common only in Neurospora spp., but linear plasmids have been found in many fungi. Circular plasmids have one open reading frame (ORF) coding for a DNA polymerase or a reverse transcriptase. Linear plasmids generally have two ORFs, coding for presumptive DNA and RNA polymerases with amino acid motifs showing homology to viral polymerases. Plasmids often attain a high copy number, in excess of that of mitochondrial DNA. Linear plasmids have a protein attached to their 5' end, and this is presumed to act as a replication primer. Most plasmids are neutral passengers, but several linear plasmids integrate into mitochondrial DNA, causing death of the host culture. Inferred amino acid sequences of linear plasmid ORFs have been used to plot phylogenetic trees, which show a fair concordance with conventional trees. The circular Neurospora plasmids have replication systems that seem to be evolutionary intermediates between the RNA and the DNA worlds.
This paper references
Plasmid suppressors active in the sexual cycle of Neurospora intermedia.
X. Yang (1993)
10.1007/978-3-642-82585-9
Plasmids of Eukaryotes
K. Esser (1986)
10.1007/978-3-662-10364-7_11
Plasmid DNA in Mycelial Fungi
F. Kempken (1995)
10.1038/345177A0
Independent transfer of mitochondrial chromosomes and plasmids during unstable vegetative fusion in Neurospora
R. Collins (1990)
10.1128/MCB.14.5.3094
The Mauriceville plasmid of Neurospora spp. uses novel mechanisms for initiating reverse transcription in vivo.
J. Kennell (1994)
10.1128/MMBR.54.1.66-74.1990
Invertrons, a class of structurally and functionally related genetic elements that includes linear DNA plasmids, transposable elements, and genomes of adeno-type viruses.
K. Sakaguchi (1990)
10.1016/0022-2836(88)90594-3
Nucleotide sequence of the Varkud mitochondrial plasmid of Neurospora and synthesis of a hybrid transcript with a 5' leader derived from mitochondrial RNA.
R. Akins (1988)
10.1016/0092-8674(84)90545-2
Intramolecular recombination as a source of mitochondrial chromosome heteromorphism in neurospora
S. R. Gross (1984)
10.1016/0092-8674(84)90499-9
The DNA sequence and genetic organization of a Neurospora mitochondrial plasmid suggest a relationship to introns and mobile elements
F. Nargang (1984)
10.1128/JB.159.1.288-293.1984
Distribution and evolutionary significance of mitochondrial plasmids in Neurospora spp.
D. O. Natvig (1984)
Identification of the reverse transcriptase encoded by the Mauriceville and Varkud mitochondrial plasmids of Neurospora.
M. T. Kuiper (1990)
10.1139/G86-069
Expression of senescence in Neurospora intermedia
A. Griffiths (1986)
10.1007/BF00312614
Homologous linear plasmids in mitochondria of three species of wheat bunt fungi, Tilletia caries, T. laevis and T. controversa
W. K. Kim (2004)
10.1101/GAD.9.3.294
The VS catalytic RNA replicates by reverse transcription as a satellite of a retroplasmid.
J. Kennell (1995)
10.1016/0147-5975(85)90001-5
Fungal mitochondrial plasmids
F. Nargang (1985)
10.1073/PNAS.90.9.4299
Two Neurospora mitochondrial plasmids encode DNA polymerases containing motifs characteristic of family B DNA polymerases but lack the sequence Asp-Thr-Asp.
Q. Li (1993)
10.1099/00221287-72-2-221
Vegetative incompatibility and cytoplasmic infection in fungi.
C. Caten (1972)
10.1007/BF00351658
Suppression of cytoplasmic senescence in Neurospora
A. J. Griffiths (2004)
10.1016/S0006-291X(05)81600-6
Electrophoretic profiles of mitochondrial plasmids in Neurospora suggest they replicate by a rolling circle mechanism.
R. Maleszka (1992)
10.1073/PNAS.80.4.1058
Construction of a shuttle vector for the filamentous fungus Neurospora crassa.
L. Stohl (1983)
10.1007/BF00318218
Analysis of large deletions in the Mauriceville and Varkud mitochondrial plasmids of Neurospora
R. Akins (2004)
Male transmission of linear plasmids and mitochondrial DNA in the fungus Neurospora.
X. Yang (1993)
10.1128/MCB.14.10.6419
A mitochondrial retroplasmid integrates into mitochondrial DNA by a novel mechanism involving the synthesis of a hybrid cDNA and homologous recombination.
C. C. Chiang (1994)
10.1007/BF00312771
Characterization of circular mitochondrial plasmids in three Pythium species
F. Martin (2004)
10.3186/JJPHYTOPATH.58.386
Detection and Properties of Plasmid-like DNA in Isolates from Twenty Three Formae Speciales of Fusarium oxysporum
N. Hirota (1992)
10.1073/PNAS.77.10.6032
Deletion mutants of Neurospora crassa mitochondrial DNA and their relationship to the "stop-start" growth phenotype.
H. Bertrand (1980)
10.1038/316641A0
Mitochondrial class II introns encode proteins related to the reverse transcriptases of retroviruses
F. Michel (1985)
10.1007/BF00419875
Extrachromosomal genetics of Claviceps purpurea
P. Tudzynski (2004)
10.1128/JB.145.1.382-390.1981
Isolation and characterization of linear deoxyribonucleic acid plasmids from Kluyveromyces lactis and the plasmid-associated killer character.
N. Gunge (1981)
10.1093/NAR/17.5.2023
The mitochondrial plasmid from Neurospora intermedia strain Labelle-1b contains a long open reading frame with blocks of amino acids characteristic of reverse transcriptases and related proteins.
S. Pande (1989)
10.1007/BF00336849
Transcripts and translation products of a mitochondrial plasmid of Claviceps purpurea
K. Gessner-Ulrich (2004)
10.1128/MCB.11.3.1696
The LaBelle mitochondrial plasmid of Neurospora intermedia encodes a novel DNA polymerase that may be derived from a reverse transcriptase.
U. Schulte (1991)
10.1007/BF00352108
Evidence for giant linear plasmids in the ascomycete Podospora anserina
J. Hermanns (2004)
10.1016/0092-8674(93)90317-J
The mauriceville plasmid reverse transcriptase can initiate cDNA synthesis de novo and may be related to reverse transcriptase and DNA polymerase progenitor
H. Wang (1993)
10.1016/0092-8674(86)90615-X
Mitochondrial plasmids of neurospora: Integration into mitochondrial DNA and evidence for reverse transcription in mitochondria
R. Akins (1986)
10.1093/NAR/20.5.1101
Evidence that a 1.6 kilobase region of Neurospora mtDNA was derived by insertion of part of the LaBelle mitochondrial plasmid.
F. Nargang (1992)
10.1016/0092-8674(81)90335-4
Characterization of a novel plasmid DNA found in mitochondria of N. crassa
R. Collins (1981)
10.1006/PLAS.1993.1021
Transcription of the kalilo linear senescence plasmid from Neurospora intermedia.
D. B. Vickery (1993)
10.1007/978-3-7091-9138-5_6
The Mitochondrial Genome of Plants
D. Lonsdale (1992)
10.1016/S0092-8674(85)80068-4
Insertion of a foreign nucleotide sequence into mitochrondrial DNA causes senescence in neurospora intermedia
H. Bertrand (1985)
Reverse transcription of the Mauriceville plasmid of Neurospora. Lack of ribonuclease H activity associated with the reverse transcriptase and possible use of mitochondrial ribonuclease H.
H. Wang (1993)
10.1128/MCB.9.2.678
Characterization of mutant mitochondrial plasmids of Neurospora spp. that have incorporated tRNAs by reverse transcription.
R. Akins (1989)
10.1038/339320A0
Independent transfer of mitochondrial plasmids in Neurospora crassa
G. May (1989)
10.1007/BF00312742
Homology between mitochondrial DNA of Agaricus bisporus and an internal portion of a linear mitochondrial plasmid of Agaricus bitorquis
M. Robison (2004)
10.1016/S0953-7562(09)80469-3
Studies on function and mobility of mitochondrial plasmids from Claviceps purpurea
K. Gessner-Ulrich (1994)
10.1016/0092-8674(86)90525-8
An extrachromosomal plasmid is the etiological precursor of kalDNA insertion sequences in the mitochrondrial chromosome of senescent neurospora
H. Bertrand (1986)
10.1093/NAR/10.5.1439
Characterization of two new plasmid DNAs found in mitochondria of wild-type Neurospora intermedia strains.
L. Stohl (1982)
10.1016/0092-8674(88)90228-0
A novel reverse transcriptase activity associated with mitochondrial plasmids of neurospora
M. T. Kuiper (1988)
10.1007/BF00419828
Unstable cytoplasms in Hawaiian strains of Neurospora intermedia
A. J. Griffiths (2004)
10.1007/978-3-642-73115-0_4
Initiation of DNA replication by primer proteins: bacteriophage phi 29 and its relatives.
M. Salas (1988)
10.1128/MCB.12.11.5131
The Mauriceville plasmid of Neurospora crassa: characterization of a novel reverse transcriptase that begins cDNA synthesis at the 3' end of template RNA.
H. Wang (1992)
10.1006/PLAS.1993.1003
Isolation and characterization of a linear plasmid from the entomopathogenic fungus Ascosphaera apis.
H. Qin (1993)
10.1111/J.1365-3059.1992.TB02326.X
Mitochondrial plasmids do not determine host range in crucifer-infecting strains of Fusarium oxysporum
E. Momol (1992)
10.1007/BF00318477
Linear, non-mitochondrial plasmids of Alternaria alternata
H. S. Shepherd (2004)
10.1139/G89-027
Linear plasmids that integrate into mitochondrial DNA in Neurospora
H. Bertrand (1989)
10.1007/BF00310498
A kalilo-like linear plasmid in Louisiana field isolates of the pseudohomothallic fungus Neurospora tetrasperma
M. Marcinko-Kuehn (2004)
10.1073/PNAS.88.17.7684
Recombination by sequence repeats with formation of suppressive or residual mitochondrial DNA in Neurospora.
A. Almasan (1991)
10.1016/0092-8674(90)90480-3
A site-specific self-cleavage reaction performed by a novel RNA in neurospora mitochondria
B. Saville (1990)
10.1007/BF00334781
Linear DNA plasmids of the perennial ryegrass choke pathogen, Epichloë typhina (Clavicipitaceae)
K. L. Mogen (2004)
10.1007/BF00352440
Genetic organization and structural features of maranhar, a senescence-inducing linear mitochondrial plasmid of Neurospora crassa
D. Court (2004)
10.1007/BF00309541
Three mitochondrial unassigned open reading frames of Podospora anserina represent remnants of a viral-type RNA polymerase gene
J. Hermanns (2004)
Plasmids of Eukaryotes: Fundamentals and Applications
K. Esser (1986)



This paper is referenced by
10.1007/978-94-007-2920-9_6
Mitochondrial Genomes of Algae
G. Burger (2012)
10.1007/BF02464050
Detection and distribution of six linear mitochondrial plasmids in the shiitake mushroom,Lentinula edodes
Y. Fukumasa-Nakai (1998)
Fungal biology in the 21st century
R. Maheshwari (2005)
10.1099/MIC.0.26994-0
Characterization of the Streptomyces lavendulae IMRU 3455 linear plasmid pSLV45.
T. Hosted (2004)
10.1146/annurev.phyto.38.1.325
Role of Horizontal Gene Transfer in the Evolution of Fungi.
U. Rosewich (2000)
Organelle Genetics: Evolution of Organelle Genomes and Gene Expression. 2011. Bullerwell C.E. (Ed.). Springer Verlag.
G. Hausner (2011)
10.1007/BF02966318
Mitochondrial inheritance in filamentous fungi
A. J. Griffiths (2008)
10.1002/BIES.20355
On the origin of telomeres: a glimpse at the pre-telomerase world.
J. Nosek (2006)
10.1016/j.mycres.2008.04.014
The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid.
E. F. Formighieri (2008)
10.1111/J.1574-6968.1997.TB10282.X
Inheritance of dsRNAs in the rice blast fungus, Magnaporthe grisea.
S. Chun (1997)
10.3186/JJPHYTOPATH.65.25
Intracellular Localization and Expression of the Plasmid pAAT56 in the Japanese Pear Pathotype of Alternaria alternata
I. Kaneko (1999)
10.1111/j.1461-0248.2011.01602.x
Parasitism and maintenance of diversity in a fungal vegetative incompatibility system: the role of selection by deleterious cytoplasmic elements.
Jérémie Brusini (2011)
UNIVERSIDADE ESTADUAL DE FEIRA DE SANTANA PROGRAMA DE PÓS-GRADUAÇÃO EM BIOTECNOLOGIA
Viviane Matos Galvão (2010)
10.1016/J.FGB.2005.10.004
Asexual transmission, non-suppressiveness and meiotic extinction of small plasmid-like derivatives of the mitochondrial DNA in Neurospora crassa.
G. Hausner (2006)
10.1007/s00122-008-0790-7
The mitochondrial genome of a cytoplasmic male sterile line of perennial ryegrass (Lolium perenne L.) contains an integrated linear plasmid-like element
P. McDermott (2008)
10.14288/1.0088437
The origin and structural features of a newly-detected plasmid in a deviant Neurospora intermedia strain
Yan Xu (1998)
10.1007/978-3-642-22380-8_13
Introns, Mobile Elements, and Plasmids
G. Hausner (2012)
10.1111/J.1574-6968.2005.00082.X
Yeast autonomous linear plasmid pGKL2: ORF9 is an actively transcribed essential gene with multiple transcription start points.
S. Jeske (2006)
10.1155/2013/918320
Analysis of Complete Genomes of Propionibacterium acnes Reveals a Novel Plasmid and Increased Pseudogenes in an Acne Associated Strain
Gabriela Kasimatis (2013)
10.1016/j.funbio.2012.06.003
In vivo conformation and replication intermediates of circular mitochondrial plasmids in Neurospora and Cryphonectria parasitica.
D. Baidyaroy (2012)
10.3103/S009545271802007X
Advances, Problems, and Prospects of Genetic Transformation of Fungi
N. Poyedinok (2018)
10.1111/J.1469-8137.2005.01492.X
Inheritance and recombination of mitochondrial genomes in plants, fungi and animals.
C. Barr (2005)
Horizontal transfer of genetic elements in the black Aspergilli
A. Diepeningen (1999)
10.1128/9781555816636.CH13
Mitochondria and Respiration
F. Nargang (2010)
10.1261/rna.047985.114
The low information content of Neurospora splicing signals: implications for RNA splicing and intron origin.
R. Collins (2015)
10.1007/PL00006271
On the Evolution of the Single-Subunit RNA Polymerases
N. Cermakian (1997)
10.1006/JMBI.2001.4783
Mitochondrial DNA from the liverwort Marchantia polymorpha: circularly permuted linear molecules, head-to-tail concatemers, and a 5' protein.
D. J. Oldenburg (2001)
Plasmids, Resistance and Hospital adaptation in Enterococci : an epidemiological approach
T. Rosvoll (2012)
10.1093/gbe/evt120
Mitochondrial Genome Rearrangements in Glomus Species Triggered by Homologous Recombination between Distinct mtDNA Haplotypes
Denis Beaudet (2013)
10.1007/s00294-004-0512-x
The mitochondrial plasmid of the true slime mold Physarum polycephalum bypasses uniparental inheritance by promoting mitochondrial fusion
R. Sakurai (2004)
10.1007/978-3-642-39339-6_15
Methods in Fungal Genetics
K. McCluskey (2013)
10.1016/j.ijfoodmicro.2016.01.008
Draft genome sequence and chemical profiling of Fusarium langsethiae, an emerging producer of type A trichothecenes.
E. Lysøe (2016)
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